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H 7028
H1 3010A [Note 1] Eu, Italy
H1a 73G
H1a1 16162G [EU369376] Pa. Quaker
H1a1a(H1a1) 6365C [s6]
H1a1a1 16209C [Note 2]
H1a1a1a 4639C
H1a1a1a1 5477T, 11253C [EF657787.c]
H1a1a1a2 1555G, 10993A [AY495189]
H1a1a1b 1116G, 7961C [AY495190]
H1a1a1c 5773A, 5922T [AY495191]
H1a1a1d 7331T, 12248G [EU215517]
H1a1a1e 3505G, 5806C [EF657456.c]
H1a1a1f G709A [EF449507]
H1a1a1g 4843T [AY495193]
H1a1b 14978G, 16051G [EF657426.c]
H1a1b1 6320C, 8468T, 9921A, 16259T [AY738972] Italy
H1a1b2 534T, 10238C, 12738C, 16159T [EF177447] Portugal
H1a1d 8271T [AY339422 AY339425] Finland
H1a1a3a 9012C, 15071C [EU130562]
H1a1a3b 323.CACA [AY339423]
H1a1a3c 152C [AY339424]
H1a1e 545A, 11257T, T16263Y [EU200235=s4]
H1a1f 16290G [EU130942] England
H1a2 5460A
H1a2a 15817G
H1a2a1 1808G, 13782T, 16318G [AY738971]
H1a2a2 16472A, 73r [AY495094]
H1a2b 1462A
H1a2b1 960.c, 4883T, 6314T [DQ112941.c]
H1a2b2 5460r [EF657256.c]
H1a2c 3316A, 14259A [EU148452]
H1a2c1 16114T [EU262984] Ashkenazie
H1a2d 9554A [EF657750.c]
H1a2e 8512G, 14902T [EF177428] Portugal
H1a2f 73r, T15071C, 16497G [DQ523657] Sardinia
H1a2f1 522-,523- [EF177428] Portugal
H1a3 2706G, 5189G, 12245C, 12358G [AF382002] Spain(Maragato)
H1a4 8224G, 16288C [EF177425] Portugal
H1b 16189C [p5, l04]
H1b1(H1b) 3796G, 16356C, 16362C
H1b1a 15924G [EF657611.c]
H1b1a1 3796r
H1b1a1a 13746T, 15261A, 2746, 13708A, 16356r, 16362r (16093C, 16368C) [EU074158]
H1b1a1b 980C [EF657742.c]
H1b1b 522-, 523- [EU219920]
H1b1b1 2483, 5899.CCi, 7870C, 8348G, 9022A, 12561A [AY738975]
H1b1b2 4769G, 6635C, 16172C, A16183-, 16193.1C [EU200237]
H1b1b3 8298C, 320T [AY195775]
H1b1b4 723G, 9007G [DQ112841.c]
H1b1b5 8994A [DQ112822.c]
H1b1b6 13926C, 15787C [EF657773.c]
H1b1b7 6182A, 14209T [EF657263.c]
H1b1b8 2145A [EF657540.c]
H1b1b9 3338C [p5, f0fra01]
H1b2(H1f) 4452C, 7309C#, 9066G" (16093C) [AY339413 AY339414 AY339415 AY339416] Finland
H1b2a 16183-
H1b2a1 459- [AY339418 AY339419] Finland
H1b2a2 10343T [AY339420] Finland
H1b2b 4985, 5054 [m43]
H1b2c 14696 [m60]
H1b2d 152C [AY339417] Finland
H1b3 12172G
H1b3a 7762A
H1b3a1 714G, 3903T, 8119C (12172r) [DQ112815.c]
H1b3a2 8730G [EU372628] Wales
H1b3b 5563A, 8572A, 8574T [EF657713.c]
H1c 477C [DQ112804.c]
H1c1 9150G [EF657642.c EF657654.c DQ112805.c DQ112807.c]
H1c1a(H1c1) 16263C [AY495157 AY495161 AY495162 AY495164]
H1c1a1 9380A [AY495160]
H1c1a1a 15734A [AY495163]
H1c1a2 9194G, 4317G [EU428754]
H1c1a3 15055C [AY495159]
H1c1a4 5945T [AY495158]
H1c1c 11778 [m41]
H1c1c1 9750 [m41]
H1c1d 5821A, 11347G [EF657623.c]
H1c1e 7468 [m2]
H1c2 8473C (defining marker?)
H1c1b1 195C
H1c1b1a 257G, 7595A [EF177411] Portugal
H1c1b1b 16325C [h1]
H1c1b2 3801C [EF657265.c, f0fra06-7]
H1e1a 16294T [f0cze11] Czech
H1c1a2 12966T, 13296T [EF657239.c]
H1c1b4 7270C [EF657741.c]
H1c1b5 4080 [m]
H1c3 12858T
H1c3a(H1c2) 8764A
H1c3a1 15466A [AY495113]
H1c3a2 2851G, 523A7, 13879A [AY495096]
H1c3b 5004C [EF657365.c]
H1c4 152C
H1c4a 1462A, 3511G, 14182A [s18]
H1c4b 5654C, 9025A [AY495141]
H1c4c 8645G, 12354C [AY495139]
H1c5 8803G [AY495102]
H1c5a 8864C, 14407G [DQ112803.c]
H1c6 16129A, 16274A [EF660953] Italy
H1c7 15325C, 73G [AY495187]
H1c8 11516T [DQ112880.c] Asian
H1d 4733C [p5] Iberian
H1d1 16129A [f0spm09, 10, 17, 20]
H1d1a 3849T [f0bc33, 5, 6]
H1d1a1 16325C [f0por71]
H1d1a2 16129- [f0bc30]
H1d1b 4659A [p5, f0bc14]
H1d2 16240G
H1d2a 152C, 2222G, 5471A [EF177436] Portugal
H1d2b 16239T [f0por37]
H1d3 593G, 2626C, 10455G [EU372630 s2 s3] France, Guatemala, ?
H1d4 16093C, 16311C [f0por73]
H1d5 1821, 15052 [m]
H1d6 9290A, 10256C [AY495119]
H1d7 6755A, 13731G [DQ112839.c]
H1d8 5249C, 7678C [EF491001]
H1e 16311C
H1e1 146C, 195C, 9938C, 10042T, 12059C, 15607G, 16129A [DQ523638 DQ523673] Sardinia
H1e2 1290T [DQ523627] Sardinia
H1e1a 14329T, 16278T [DQ523632] Sardinia
H1e3 723G, 7271G, 8952C, 11549T [AY738978] Italy
H1e4 8282T [DQ523648] Sardinia
H1f 14287C (Iberian-Med) [a04] (old H1f: see H1b2)
H1f1 3666A [a04_40, f00por52 61, bc09)
H1f1a 11719A [AY738979] Italy
H1f1b 5393, 5894 [m]
H1f2 4062C, 16294T [AY738980] Italy
H1g 150T [fhdna.2 p5.p]
H1g1 2385A
H1g1a 4688C, 6216C, 16261T [EF177421] Portugal
H1g1b 73G [fhdna-fra.2]
H1g1c 16299G [h1.2]
H1g2 6848T, 16320A/C [EF177432] Portugal
H1i 11914A
H1i1 7013A [EF657711.c EF657367.c]
H1i1a 16072T [p5 f0-3] Czech
H1i1b 16320T [p5 f0-1] Spain
H1i2 146C, 14482T, 14564G [AY339412] Finland
H1j 15323A [m63]
H1j1 12341T [AY495106]
H1j1a 2294R [DQ112940.c]
H1j2 16129A [AY495152]
H1l 8602C [EF657479.c] (Placement uncertain HV not tested)
H1l1 624, 14212C [EF657782.c]
H1l1a 6249A [EF657466.c]
H1l2 5460A, 6365C [EF657479.c]
H1m 9356T [il157fra.f]
H1m1 13581, 15892 [m64]
H1m2 10187C [EF657452.c]
H1m3 678C [AF346981] France
H1n 9923T
H1n1 3483A, 10586A, 14766T, 14767C [EF657626.c]
H1n2 7975G [AY495103]
H1n3 8014G [DQ112861.c]
H1o 11864C (152C?) [EF657501.c]
H1o1 523.1C, 523.2A, 15497A, 152C [AY495144]
H1o1a 64T, 11824R(?) [AY495124]
H1p 4859C
H1p1 1009T, 5237A, 8856A, 9948A, 14258A [EF657644.c]
H1p2 9299G, 10373A, 14016A [EF657590.c]
H1q 2098A
H1q1 146C
H1q1a 524.CA, 15742A, 15924G, 16468C [EU089747]
H1q1b 5483C, 8380C, 13431T, (16189C) [il155rus.f]
H1q2 10169T, 12338C, 15217A [EF657497.c]
H1r 9708C
H1r2 2352C, 5516G, 8149G, 9804A, 9861C [EF657775.c]
H1r1 14971C [EF657670.c]
H1s 6237A
H1s2 8507T, 9300A, 11611A, 15110A [EF657613.c]
H1s1 14470C [EF657459.c]
H1t 15589A
H1t1 10654T, 12453C [EF657559.c]
H1t2 2281G, 6253C [DQ112862.c]
H1u 9986A
H1u1 14129T, 14224G [DQ112766.c] Spain
H1u2 569T, 5978G [EF177427] Portugal
H1v 16234T
H1v1 13943T, 573.cCC [AY738981] Italy
H1v2 15047A, 16189C [AY738982] Italy
H1w 7543G, 14766T, 16193T [DQ523678] Sardaigne
H1w1 16569 [DQ523681] Sardaigne
H1x 8839A, 15789T [il98e.c]
H1x1 13098G [EF657267.c]
H1y 14350T [EF657443.c]
H1y1 3699G [EF657409.c]
H1z 8308G [EF657465.c]
H1z1 8812G [AY495099]
H1aa 6272G, 14869A
H1aa2 11800G, 12011C, 13029T, 13708A [EF657730.c]
H1aa1 3010(r?), 10448 [m4]
H1ab 16291T
H1ab1 10003C, 368G [AY738977] Iraq
H1ab2 T15519C [EU007846]
H1-AAA 93G (n=5 USA, Cze, Swe:FGS=1) [h1]
H1-AAB 4772C [EF657372.c EF657383.c]
H1-AA 6364 (confusion with 6365?) [m4, 2]
H1-AA1 3460, 5147, 10604 [m41]
H1-AA 3221G, 8705C, 9581C, 11204C, 16129A [AY495147]
H1-AB 709A, 236C, 1900G, 5899.c, 6040G, 16294T [AY738974]
H1-AC 460C, 3621C, 7951G, 8701G, 12493G (16129A) [AY495153]
H1-CH T684W, 11736C, 16270T, 16276C, 16566A [EF660923] Italy
H1-AD 1508T, 6480A, 6755A, 7830A [EF657429.c]
H1-AE 523.cA, 11299C, 228A, 16233G [AY738973] (Egypt)
H1-AF 8859T, 16188T, 16319A, 16320T [DQ523670] (Sardinia)
H1-CF G3842R, 6620C, 11929C, 14470C [EF660919]
H1-CG 3306T, 3826C, 6776C, 10658R [EU233277]
H1-CI 5442C, 9932A, 12562G, 14149T [EF660951] Italy
H1-CJ 146C, 195C, 7930T, 10771G [EF660914]
H1-A 11950G, 13907G, 14329T [DQ523635 DQ523641] (Sardinia)
H1-AG 10325A, 12880C, (15326r) [EF657500.c]
H1-AH 9017, 13051, 14278 [m41]
H1-AI 8618C, 9621A, 14133G [EF657394.c]
H1-AJ 8470G, 13111C, 15553A [EF657744.c] (15553 also seen in H*)
H1-AK 4707A, 4976G, 10049G [AY495112]
H1-AL 7927G, 7978G, 11893G [EF657424.c]
H1-AM 16291T, 10003C, 368G [AY738977]
H1-AN 7891T, 8277C, 15172A [DQ112937.c]
H1-AO 152C, 5390G 16301T [AY339421]
H1-CD 2589G, 14927G, 16302G [EF526076]
H1-CK 1374T, 3507T, 11447A [EF458167]
H1-AP 7669, 14233 [AF381993] Mauritania
H1-AQ 8392A, 16126C [EF177446] Portugal
H1-AR 2272T, 10685A [EF376015] Sweden
H1-AS 4655, 16344C (93G, 263G) [p5, f0por67]
H1-CC 8572A, T16243C [EU080974]
H1-AT 11026, 13878 [m2]
H1-AU 3396C, 8461T [EF657515.c]
H1-AV 5628, 10348 [m56]
H1-AW 5780, 8410 [m43]
H1-AX 3531A, 8417A [EF657235.c]
H1-AY 7984A, 15153A [EF657458.c]
H1-AZ 4767G, 8750C [EF657575.c]
H1-BA 8478T, 14251G [EF657483.c]
H1-BB 12311.A, 14974G [EF657406.c]
H1-BC 735G, 13781C [EF657307.c]
H1-BD 3083C, 16107T [f0bc20]
H1-BE 5309G, 4763A [s7]
H1-BF 13203, 15688 [m43]
H1-CE 1717C, 7885C [EF660913] Italy
H1-BG 522-, 523-, 9921A, 11084G [AY495100]
H1-BH 3666A, 13966G [DQ112962.c] African
H1-BI 4820A (195C, 263G) [f0spm05]
H1-BJ 10101C [EF657404.c]
H1-BK 3339A/T (263G) [f0por69]
H1-BL 2330C [EF657480.c]
H1-BM 8371T [DQ112827.c]
H1-BN 15313C [EF657769.c]
H1-BO 3897A [p5.p]
H1-BP 5788C [EF657495.c]
H1-BQ 3144 (NW) [p5]
H1-BR 7604 [m2]
H1-BS 8921A [EF657292.c]
H1-BT 8993 [m75]
H1-BU 6456A [EF657276.c]
H1-BVV 4742C [p5, f0bc04]
H1-BV 3891 (Med-NRE) [p5]
H1-BW 3110T [f0por23]
H1-BX 9058G [EF657261.c]
H1-BY 16411T [ftdna]
H1-BZ 3746G (152C, 235, 263G) [EF657734.c]
H1-CA 4462 (NE) [p5]
H1-CB 3290G (AJ-NW) [p5 f00aj03]
v.12.7 (20080221-00:10ET) Added 1 private record (s21 at H1a1a1).
(2/2) Added 1 GenBank record (at H1c1a2)
(1/23) Added 3 GenBank record (EU372628, EU369376=s9, EU372630=s1, ) 12172G becomes H1b3 (was H1k), downstream of 16189C, as new sample EU372628 seems to support. More samples needed for confirmation.
Added 3 GenBank record. (EU215517 EU200237 EU089747)
Fixed Phylogeny of 8743. Does not seem downstream of 9150 as previsouly thought (returns to H1c2).
Added most missing GenBank records.
Revised Phylogeny for 5460.
Added new sample at H1c3a.
H1a* phylogeny readjusted closer to Brandstatter (2006)'s data.
Genbank reference changing to accession numbers, as prescribed.
Genbank cross-referenced and re-sourced.
- The 4733C subclade has been reassigned to the elusive H1d, which original suggestion seems forgotten.
1. AY495117 AY738976(ita) EF657431.c EF657683.c DQ112767(spa).c EF657393.c EF657411.c EF657614.c DQ112863.c
2. AY495188 AY495192 AY495194 EF657619.c EF657629.c EF657656.c EF657721.c s21